Getting Started

Introduction

This section will give a quick outline of the design of ssbio and the scientific topics behind it.

The basics

ssbio was developed with simplicity in mind, and also as a direct extension of COBRApy. Furthermore, we didn’t want to reinvent the wheel wherever possible, and thus Biopython classes and modules are used wherever possible.

Structural biology

This section will give a very brief background on some structural biology topics.

Protein structures

Systems biology

This section will give a very brief background on some systems biology topics.

COBRA models & COBRApy

COBRA models & COBRApy

Reading